STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1061696105'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (990 aa)    
Predicted Functional Partners:
LOC106175320
Decapping and exoribonuclease protein isoform X1.
   
 
 0.962
LOC106177617
Decapping and exoribonuclease protein-like.
   
 
 0.962
LOC106158511
Fas-binding factor 1 homolog.
   
 
 0.916
LOC106169071
Regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1.
   
 
 0.916
LOC106170196
Fas-binding factor 1.
   
 
 0.916
LOC106168392
5'-3' exoribonuclease 1.
  
 
 
0.899
LOC106178368
Polynucleotide 5'-hydroxyl-kinase NOL9.
   
 
 0.789
LOC106175922
Regulation of nuclear pre-mRNA domain-containing protein 2.
   
 
 0.785
LOC106172567
Titin homolog.
   
 
 0.782
LOC106173061
Protein RRP5 homolog isoform X4.
   
 0.739
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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