STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106170180tRNase Z TRZ1 isoform X1. (326 aa)    
Predicted Functional Partners:
LOC106161191
Zinc phosphodiesterase ELAC protein 2.
     
 0.914
LOC106166286
Zinc phosphodiesterase ELAC protein 1.
     
 0.914
LOC106170380
Zinc phosphodiesterase ELAC protein 1-like.
     
 0.914
LOC106172336
Zinc phosphodiesterase ELAC protein 2-like.
     
 0.914
LOC106151390
Nuclease EXOG, mitochondrial.
   
   0.490
LOC106171507
Endonuclease.
   
   0.490
LOC106173506
Endonuclease.
   
   0.490
LOC106180936
ATP-dependent RNA helicase SUPV3L1, mitochondrial isoform X1.
   
  
 0.479
LOC106151463
Exosome complex component RRP46.
  
 
 0.460
LOC106152506
Exosome complex component MTR3-like.
  
 
 0.460
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.