LOC106170623 protein (Lingula anatina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC106170623

Coiled-coil domain-containing protein 92. (317 aa)

Predicted Functional Partners:

LOC106154232

0.655

LOC106156533

0.655

LOC106172909

0.644

LOC106152828

0.640

LOC106163869

0.637

LOC106170568

0.633

LOC106180875

0.632

LOC106176067

0.631

LOC106177770

0.630

LOC106155205

0.629

Your Current Organism:

Lingula anatina

NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106152828	LOC106154232	A0A1S3HA80	A0A1S3HD68	26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	26S proteasome non-ATPase regulatory subunit 8.	0.989
LOC106152828	LOC106156533	A0A1S3HA80	A0A1S3HMN2	26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	26S proteasome non-ATPase regulatory subunit 8-like.	0.989
LOC106152828	LOC106163869	A0A1S3HA80	A0A1S3IFI7	26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.	0.999
LOC106152828	LOC106170623	A0A1S3HA80	A0A1S3J6V4	26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	Coiled-coil domain-containing protein 92.	0.640
LOC106152828	LOC106172909	A0A1S3HA80	A0A1S3JG06	26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	Proteasomal ubiquitin receptor ADRM1 isoform X1.	0.998
LOC106154232	LOC106152828	A0A1S3HD68	A0A1S3HA80	26S proteasome non-ATPase regulatory subunit 8.	26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	0.989
LOC106154232	LOC106156533	A0A1S3HD68	A0A1S3HMN2	26S proteasome non-ATPase regulatory subunit 8.	26S proteasome non-ATPase regulatory subunit 8-like.	0.900
LOC106154232	LOC106163869	A0A1S3HD68	A0A1S3IFI7	26S proteasome non-ATPase regulatory subunit 8.	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.	0.989
LOC106154232	LOC106170623	A0A1S3HD68	A0A1S3J6V4	26S proteasome non-ATPase regulatory subunit 8.	Coiled-coil domain-containing protein 92.	0.655
LOC106154232	LOC106172909	A0A1S3HD68	A0A1S3JG06	26S proteasome non-ATPase regulatory subunit 8.	Proteasomal ubiquitin receptor ADRM1 isoform X1.	0.989
LOC106155205	LOC106170568	A0A1S3HH13	A0A1S3J674	Coiled-coil domain-containing protein 96.	Coiled-coil domain-containing protein 113-like.	0.599
LOC106155205	LOC106170623	A0A1S3HH13	A0A1S3J6V4	Coiled-coil domain-containing protein 96.	Coiled-coil domain-containing protein 92.	0.629
LOC106155205	LOC106180875	A0A1S3HH13	A0A1S3KE23	Coiled-coil domain-containing protein 96.	Coiled-coil domain-containing protein 125 isoform X1.	0.633
LOC106156533	LOC106152828	A0A1S3HMN2	A0A1S3HA80	26S proteasome non-ATPase regulatory subunit 8-like.	26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	0.989
LOC106156533	LOC106154232	A0A1S3HMN2	A0A1S3HD68	26S proteasome non-ATPase regulatory subunit 8-like.	26S proteasome non-ATPase regulatory subunit 8.	0.900
LOC106156533	LOC106163869	A0A1S3HMN2	A0A1S3IFI7	26S proteasome non-ATPase regulatory subunit 8-like.	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.	0.989
LOC106156533	LOC106170623	A0A1S3HMN2	A0A1S3J6V4	26S proteasome non-ATPase regulatory subunit 8-like.	Coiled-coil domain-containing protein 92.	0.655
LOC106156533	LOC106172909	A0A1S3HMN2	A0A1S3JG06	26S proteasome non-ATPase regulatory subunit 8-like.	Proteasomal ubiquitin receptor ADRM1 isoform X1.	0.989
LOC106163869	LOC106152828	A0A1S3IFI7	A0A1S3HA80	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.	26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	0.999
LOC106163869	LOC106154232	A0A1S3IFI7	A0A1S3HD68	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.	26S proteasome non-ATPase regulatory subunit 8.	0.989