STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106171293Ubiquitin carboxyl-terminal hydrolase. (464 aa)    
Predicted Functional Partners:
LOC106176866
Hepatocyte growth factor-regulated tyrosine kinase substrate.
   
 0.765
LOC106152458
ubiquitin-40S ribosomal protein S27a.
    
 0.724
LOC106151735
Signal transducing adapter molecule 2 isoform X2.
    
 0.708
LOC106175705
Signal transducing adapter molecule 2-like isoform X1.
    
 0.708
LOC106173257
E3 ubiquitin-protein ligase NRDP1-like.
    
 0.705
LOC106173254
E3 ubiquitin-protein ligase NRDP1.
    
 0.705
LOC106158739
Uncharacterized protein LOC106158739 isoform X1.
   
 0.653
LOC106158737
Uncharacterized protein LOC106158737.
   
 0.653
LOC106162602
ubiquitin-60S ribosomal protein L40.
   
 0.653
LOC106176377
Polyubiquitin.
   
 0.653
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.