STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106170971Transcription factor Sox-7. (495 aa)    
Predicted Functional Partners:
LOC106155607
Transcription factor 7-like 2 isoform X1.
    
0.699
LOC106151310
Catenin beta isoform X2.
    
 0.677
LOC106153364
Catenin beta isoform X1.
    
 0.677
LOC106156056
Silk gland factor 1.
    
 
 0.628
LOC106176201
Runt-related transcription factor 1 isoform X1.
   
 0.613
LOC106157526
Transcription factor GATA-4 isoform X1.
   
 0.603
LOC106165039
Transcription factor SOX-4-like.
  
  
0.592
LOC106166946
Transcription factor SOX-14.
  
 
0.524
LOC106166716
Transcription factor Sox-2.
  
 
0.513
LOC106181033
Uncharacterized protein LOC106181033 isoform X1.
    
 
 0.508
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.