STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106172160Helicase with zinc finger domain 2-like. (790 aa)    
Predicted Functional Partners:
LOC106154474
Helicase with zinc finger domain 2-like.
 
      0.887
LOC106161202
Exosome RNA helicase MTR4.
   
 0.780
LOC106150407
Exosome complex component CSL4 isoform X1.
   
 0.743
LOC106157679
Exosome complex component RRP43 isoform X1.
   
 0.726
LOC106151463
Exosome complex component RRP46.
   
 0.715
LOC106174537
Exosome complex component RRP4.
   
 0.715
LOC106168554
m7GpppN-mRNA hydrolase.
  
 0.696
LOC106168392
5'-3' exoribonuclease 1.
   
 0.684
LOC106170324
LOW QUALITY PROTEIN: CREB-binding protein.
   
 
 0.677
LOC106172283
Exosome complex component RRP45.
   
 0.668
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.