STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106172114Polymerase delta-interacting protein 2-like. (319 aa)    
Predicted Functional Partners:
LOC106181029
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.597
LOC106178325
39S ribosomal protein L2, mitochondrial.
   
  
 0.524
LOC106151358
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.496
LOC106166455
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.496
LOC106173148
Serum response factor-binding protein 1-like isoform X1.
  
  
 0.496
LOC106181777
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.496
LOC106157842
Cytochrome b-245 light chain-like.
      
 0.483
LOC106162431
ATP-dependent Clp protease proteolytic subunit.
   
 
 0.468
LOC106152626
NADH-ubiquinone oxidoreductase subunit 8.
   
  
 0.419
LOC106150691
Serine/threonine-protein phosphatase.
  
  
 0.400
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.