STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106173274Carnitine O-palmitoyltransferase 1, liver isoform. (778 aa)    
Predicted Functional Partners:
LOC106160133
Carnitine O-palmitoyltransferase 2, mitochondrial; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.925
LOC106153946
long-chain-fatty-acid--CoA ligase 4.
   
 
 0.703
LOC106160660
long-chain-fatty-acid--CoA ligase 4-like isoform X1.
   
 
 0.703
LOC106152702
long-chain-fatty-acid--CoA ligase 1 isoform X1.
     
 0.685
LOC106155420
long-chain-fatty-acid--CoA ligase ACSBG2 isoform X1.
     
 0.685
LOC106162692
long-chain-fatty-acid--CoA ligase 1 isoform X1.
     
 0.685
LOC106162691
long-chain-fatty-acid--CoA ligase 5.
     
 0.685
LOC106168418
acyl-CoA synthetase family member 4.
      
 0.410
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.