STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106173254E3 ubiquitin-protein ligase NRDP1. (317 aa)    
Predicted Functional Partners:
LOC106153603
Receptor protein-tyrosine kinase.
    
 0.982
LOC106177307
E3 ubiquitin-protein ligase CBL-B.
    
 0.913
LOC106161242
E3 ubiquitin-protein ligase.
    
 0.908
LOC106177109
E3 ubiquitin-protein ligase.
    
 0.908
LOC106151787
E3 ubiquitin-protein ligase.
    
 0.907
LOC106152645
Ubiquitin carboxyl-terminal hydrolase 8-like; Belongs to the peptidase C19 family.
    
 0.903
LOC106154806
TNF receptor-associated factor 6.
    
 
0.903
LOC106164987
Ubiquitin carboxyl-terminal hydrolase 8; Belongs to the peptidase C19 family.
    
 0.903
LOC106168821
TNF receptor-associated factor 6 isoform X1.
    
 
0.903
LOC106166604
Fibroblast growth factor receptor 3 isoform X1.
     
  0.900
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.