STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106173542E3 ubiquitin-protein ligase MARCH2. (371 aa)    
Predicted Functional Partners:
LOC106173913
FK506-binding protein.
    
 
 0.545
LOC106152592
CCR4-NOT transcription complex subunit 2 isoform X1.
    
 
 0.510
LOC106158915
CCR4-NOT transcription complex subunit 2-like.
    
 
 0.510
LOC106161655
U3 small nucleolar ribonucleoprotein protein IMP4.
      
 0.495
LOC106174552
Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.486
LOC106166203
Syntaxin-6.
    
 
 0.431
LOC106158484
Feline leukemia virus subgroup C receptor-related protein 1.
   
  
 0.415
LOC106158483
Feline leukemia virus subgroup C receptor-related protein 1 isoform X1.
   
  
 0.415
LOC106154641
Spermatogenesis-associated protein 5-like.
    
 
 0.410
LOC106165034
Transitional endoplasmic reticulum ATPase isoform X2; Belongs to the AAA ATPase family.
    
 
 0.410
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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