STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106174077Heat shock factor protein 1. (294 aa)    
Predicted Functional Partners:
LOC106172755
Heat shock protein 83.
    
 0.887
LOC106174398
NAD-dependent protein deacetylase sirtuin-1 isoform X1.
   
 0.817
LOC106159270
Prostaglandin E synthase 3.
    
 0.785
LOC106170554
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.785
LOC106177827
Heat shock factor-binding protein 1.
    
 0.774
LOC106175040
Glycogen synthase kinase-3 beta isoform X2; Belongs to the protein kinase superfamily.
    
 0.745
LOC106170183
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.720
LOC106179980
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.720
LOC106160916
MAP kinase-activated protein kinase 2; Belongs to the protein kinase superfamily.
    
 0.715
LOC106152011
Heat shock cognate 71 kDa protein; Belongs to the heat shock protein 70 family.
    
 0.689
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.