STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106174487Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling. (182 aa)    
Predicted Functional Partners:
LOC106150466
Nicalin-1-like.
   
 
 0.941
LOC106157063
Transmembrane protein 147.
   
 
 0.925
LOC106156180
Protein transport protein Sec61 subunit alpha.
    
 
 0.888
LOC106153915
phenylalanine--tRNA ligase beta subunit-like.
 
      0.861
LOC106181186
phenylalanine--tRNA ligase beta subunit-like.
 
      0.860
LOC106154753
Coiled-coil domain-containing protein 47.
    
 
 0.855
LOC106160260
Coiled-coil domain-containing protein 47-like isoform X1.
    
 
 0.855
LOC106164352
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
   0.851
LOC106179865
60S ribosomal protein L7a-like.
   
   0.830
LOC106151692
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
   0.829
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.