STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106165713Zinc finger Ran-binding domain-containing protein 2-like isoform X1. (357 aa)    
Predicted Functional Partners:
LOC106160639
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
     
 0.759
LOC106173994
Transcription initiation factor TFIID subunit 4-like isoform X1.
   
  0.743
LOC106158437
Splicing regulatory glutamine/lysine-rich protein 1 isoform X1.
   
 0.741
LOC106166403
Transcription initiation factor TFIID subunit 12 isoform X1.
   
  0.739
LOC106170577
Heterogeneous nuclear ribonucleoprotein K.
   
 0.697
LOC106154948
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
     
 0.693
LOC106181657
Transcription initiation factor TFIID subunit 9B.
    
  0.680
LOC106178021
DNA-directed RNA polymerase II subunit RPB7.
   
 0.671
LOC106174196
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
     
 0.661
LOC106169073
DNA-directed RNA polymerase II subunit RPB3 isoform X1.
    
 0.658
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.