STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10617491839S ribosomal protein L47, mitochondrial. (243 aa)    
Predicted Functional Partners:
LOC106152314
Probable 39S ribosomal protein L23, mitochondrial.
   
 
 0.996
LOC106153201
39S ribosomal protein L19, mitochondrial isoform X1.
   
 
 0.994
LOC106178176
39S ribosomal protein L21, mitochondrial.
   
 
 0.994
LOC106178015
39S ribosomal protein L4, mitochondrial.
   
 
 0.993
LOC106157452
Putative 28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.992
LOC106154615
Uncharacterized protein LOC106154615.
   
 
 0.991
LOC106168492
39S ribosomal protein L13, mitochondrial.
   
 
 0.991
LOC106181871
Uncharacterized protein LOC106181871 isoform X1.
   
   0.991
LOC106167237
28S ribosomal protein S15, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.989
LOC106178434
28S ribosomal protein S35, mitochondrial.
   
 
 0.989
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.