STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106175501SLIT-ROBO Rho GTPase-activating protein 1 isoform X1. (1166 aa)    
Predicted Functional Partners:
LOC106176107
Uncharacterized protein LOC106176107.
   
 0.950
LOC106171681
Intersectin-1-like.
   
 0.759
LOC106176210
Intersectin-1.
   
 0.759
LOC106163524
F-BAR domain only protein 2.
   
 0.716
LOC106175678
ATPase family AAA domain-containing protein 2.
   
  
 0.656
LOC106179318
tRNA-splicing endonuclease subunit Sen2.
    
   0.652
LOC106173821
wiskott-Aldrich syndrome protein-like.
   
 0.631
LOC106169792
Neural Wiskott-Aldrich syndrome protein.
   
 0.631
LOC106153143
Formin-like protein CG32138.
   
 0.630
LOC106174465
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
      
 0.628
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.