STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106175368Spermatogenesis-associated protein 5 isoform X1. (793 aa)    
Predicted Functional Partners:
LOC106153845
UBX domain-containing protein 7.
   
 0.999
LOC106155797
UBX domain-containing protein 7.
   
 0.999
LOC106153857
Ubiquitin recognition factor in ER-associated degradation protein 1.
    
 0.961
LOC106172374
Nuclear protein localization protein 4 homolog.
   
 0.961
LOC106174878
NSFL1 cofactor p47.
   
 0.950
LOC106155209
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.908
LOC106154641
Spermatogenesis-associated protein 5-like.
  
  
 
0.900
LOC106166566
Ubiquitin thioesterase OTU1.
   
 0.898
LOC106166740
Ataxin-3 isoform X1.
   
 0.891
LOC106181698
UBX domain-containing protein 1-A.
   
 0.850
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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