STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106175390Uncharacterized protein KIAA1109 isoform X2. (5188 aa)    
Predicted Functional Partners:
LOC106178085
Tubby-like protein; Belongs to the TUB family.
      
 0.629
LOC106162592
TBC1 domain family member 5-like isoform X1.
      
 0.552
LOC106171674
Neuroguidin.
      
 0.426
LOC106172547
Uncharacterized protein LOC106172547.
      
 0.418
LOC106174467
Neuroblastoma-amplified sequence-like.
      
 0.418
LOC106181753
Neuroblastoma-amplified sequence.
      
 0.418
LOC106171895
Barrier-to-autointegration factor.
      
 0.408
LOC106169503
Pseudouridylate synthase 7 homolog isoform X1.
      
 0.402
LOC106172178
Pseudouridylate synthase 7 homolog.
      
 0.402
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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