STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106175710Unconventional prefoldin RPB5 interactor-like. (351 aa)    
Predicted Functional Partners:
LOC106174063
DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1.
    
 
 0.838
LOC106178647
Protein UXT-like.
    
 
 0.825
LOC106176881
Prefoldin subunit 2.
    
 
 0.815
LOC106178608
Prefoldin subunit 6.
    
 
 0.791
LOC106170551
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.734
LOC112041238
DNA-directed RNA polymerases I, II, and III subunit RPABC1-like.
    
 
 0.725
LOC106172650
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.685
LOC106151333
RNA polymerase II-associated protein 3.
    
 
 0.660
LOC106178011
P53 and DNA damage-regulated protein 1-like.
    
 
 0.613
LOC106156946
PIH1 domain-containing protein 1-like.
    
 
 0.556
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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