STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106176319Uncharacterized protein LOC106176319. (1350 aa)    
Predicted Functional Partners:
LOC106150826
Protein unc-79 homolog.
    
 0.750
LOC106153350
LOW QUALITY PROTEIN: protein unc-79 homolog.
    
 0.750
LOC106166223
Small ubiquitin-related modifier.
    
 0.646
LOC106170853
E3 SUMO-protein ligase RanBP2.
   
 0.578
LOC106177627
RANBP2-like and GRIP domain-containing protein 5/6.
   
 0.578
LOC106172199
DNA ligase 1-like.
    
 0.545
LOC106163731
Little elongation complex subunit 2 isoform X1.
   
  
 0.513
LOC106172383
Uncharacterized protein LOC106172383 isoform X1.
      
 0.512
LOC106169775
Lysine-specific demethylase 6A-like.
   
 0.455
LOC106181631
Lysine-specific demethylase 6A isoform X3.
   
 0.455
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.