STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106177280Iron-sulfur cluster co-chaperone protein HscB, mitochondrial-like. (292 aa)    
Predicted Functional Partners:
LOC106173310
Iron-sulfur cluster assembly 2 homolog, mitochondrial.
   
 
 0.754
LOC106155792
Iron-sulfur cluster assembly 1 homolog, mitochondrial-like.
     
 0.727
LOC106151387
60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.
  
 0.675
LOC106155975
Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
    
 0.609
LOC106176543
Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.
  
 0.601
LOC106159206
Uncharacterized protein LOC106159206; Belongs to the heat shock protein 70 family.
  
 0.601
LOC106161732
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial isoform X1.
     
 0.551
LOC106172370
Complex III assembly factor LYRM7 isoform X2; Belongs to the complex I LYR family.
    
 
 0.548
LOC106153157
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex. Electrons are transferred from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RN [...]
      
 0.525
LOC106176914
bolA-like protein DDB_G0274169; Belongs to the BolA/IbaG family.
   
 
 0.523
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.