STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106177672Partner of Y14 and mago-like. (208 aa)    
Predicted Functional Partners:
LOC106171418
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 0.999
LOC106163581
Protein mago nashi homolog 2.
    
 
 0.991
LOC106169811
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
    
 
 0.699
LOC106177302
Protein AAR2 homolog.
   
  
 0.643
LOC106155121
Sulfite oxidase.
      
 0.634
LOC106152096
Translocation protein SEC63 homolog.
      
 0.632
LOC106171160
Stomatin-like protein 2, mitochondrial.
      
 0.589
LOC106154323
Regulator of nonsense transcripts 2.
      
 0.558
LOC106176279
Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance; Belongs to the MGME1 family.
      
 0.532
LOC106180265
Regulator of nonsense transcripts 3A.
    
 
 0.414
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.