STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106178779E3 ubiquitin-protein ligase TRAF7-like. (660 aa)    
Predicted Functional Partners:
LOC106164356
LOW QUALITY PROTEIN: AN1-type zinc finger protein 4-like.
    
 0.924
LOC106152458
ubiquitin-40S ribosomal protein S27a.
    
 0.840
LOC106153808
Uncharacterized protein LOC106153808 isoform X1.
    
 0.836
LOC106178764
Baculoviral IAP repeat-containing protein 6.
    
 0.836
LOC106180098
Putative inhibitor of apoptosis.
    
 0.836
LOC106181040
Baculoviral IAP repeat-containing protein 6 isoform X1.
    
 0.836
LOC106180953
NEDD8.
    
 0.806
LOC106152466
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.805
LOC106152040
Uncharacterized protein LOC106152040 isoform X1.
    
 0.797
LOC106158739
Uncharacterized protein LOC106158739 isoform X1.
    
 0.797
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.