STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106180629Probable peptidyl-tRNA hydrolase 2. (205 aa)    
Predicted Functional Partners:
LOC106167384
Ubiquitin carboxyl-terminal hydrolase.
    
  0.539
LOC106176895
Mitochondrial inner membrane protein COX18.
      
 0.503
LOC106155121
Sulfite oxidase.
      
 0.493
LOC106171759
Nucleosome-remodeling factor subunit BPTF.
      
 0.493
LOC106165369
Mitochondrial import receptor subunit TOM20 homolog.
   
 
 0.474
LOC106160707
Cytochrome c-like; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.454
LOC106155809
Peptidylprolyl isomerase.
   
  0.430
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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