STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106181777rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (355 aa)    
Predicted Functional Partners:
LOC106179586
Bystin.
   
 
 0.917
LOC106161215
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
 0.891
LOC106177706
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
 0.891
LOC106152466
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.858
LOC106161655
U3 small nucleolar ribonucleoprotein protein IMP4.
   
   0.828
LOC106163600
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.826
LOC106175920
28S ribosomal protein S9, mitochondrial.
   
 
 0.823
LOC106162248
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.815
LOC106151786
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 
 0.813
LOC106155221
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.813
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.