STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106182014E3 ubiquitin-protein ligase TRIM39 isoform X1. (418 aa)    
Predicted Functional Partners:
LOC106152458
ubiquitin-40S ribosomal protein S27a.
    
 0.517
LOC106153808
Uncharacterized protein LOC106153808 isoform X1.
    
 0.514
LOC106178764
Baculoviral IAP repeat-containing protein 6.
    
 0.514
LOC106180098
Putative inhibitor of apoptosis.
    
 0.514
LOC106181040
Baculoviral IAP repeat-containing protein 6 isoform X1.
    
 0.514
LOC106153652
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.421
LOC106156482
Uncharacterized protein LOC106156482.
   
 0.421
LOC106160033
Uncharacterized protein LOC106160033.
   
 0.421
LOC106161376
Probable serine/threonine-protein kinase pats1.
   
 0.421
LOC106163452
Probable serine/threonine-protein kinase roco4.
   
 0.421
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.