STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106181958Protein transport protein Sec24A. (858 aa)    
Predicted Functional Partners:
LOC106154800
Protein transport protein Sec31A-like.
   
 0.999
LOC106157605
Protein transport protein Sec24C isoform X1.
   
0.999
LOC106176654
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
0.999
LOC106172041
Protein SEC13 homolog; Belongs to the WD repeat SEC13 family.
   
 0.998
LOC106178153
Uncharacterized protein LOC106178153.
   
 0.993
LOC106181957
GTP-binding protein SAR1 isoform X1; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.990
LOC106172942
Protein SEC13 homolog; Belongs to the WD repeat SEC13 family.
   
 0.987
LOC106154623
Protein transport protein sec16.
   
 0.976
LOC106177059
Protein transport protein sec16.
   
 0.976
LOC106152703
Ankyrin repeat domain-containing protein 40.
   
 0.975
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.