STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106170128RNA polymerase II-associated protein 1. (1645 aa)    
Predicted Functional Partners:
LOC106176534
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
    
 
 0.796
LOC106154625
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
    
 
 0.656
LOC106169073
DNA-directed RNA polymerase II subunit RPB3 isoform X1.
    
 
 0.578
LOC106174887
GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
      
 0.578
LOC106174489
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1.
      
 0.511
LOC106151333
RNA polymerase II-associated protein 3.
      
 0.510
LOC106170551
RuvB-like helicase; Belongs to the RuvB family.
      
 0.485
LOC106152933
DNA-directed RNA polymerase II subunit GRINL1A-like.
    
 
 0.418
LOC106174051
DNA-directed RNA polymerase II subunit GRINL1A.
    
 
 0.418
LOC106156048
DNA-directed RNA polymerases I and III subunit RPAC1.
    
 
 0.408
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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