STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106155916Procollagen galactosyltransferase 1 isoform X2. (612 aa)    
Predicted Functional Partners:
LOC106160356
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1.
   
0.976
LOC106170279
Cullin-1; Belongs to the cullin family.
 
      0.788
LOC106177122
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.778
LOC106168489
Collagen alpha-1(I) chain isoform X1.
    
  0.529
LOC106158814
Mannosyl-oligosaccharide glucosidase.
   
 
 0.507
LOC106162436
Carbohydrate sulfotransferase.
      
 0.505
LOC106161886
Eukaryotic translation initiation factor 4 gamma 2.
     
 0.487
LOC106173904
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2.
   
 0.480
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.