STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106175405piggyBac transposable element-derived protein 4-like. (578 aa)    
Predicted Functional Partners:
LOC106173141
Zinc finger MYM-type protein 2.
    
 
 0.646
LOC106168599
Uncharacterized protein LOC106168599.
  
 0.551
LOC106157374
Histone-lysine N-methyltransferase SETMAR.
    
 
 0.526
LOC106160141
Histone-lysine N-methyltransferase SETMAR-like.
    
 
 0.526
LOC106159001
RNA polymerase II degradation factor 1.
   
 
 0.516
LOC106178991
RNA-binding protein 33 isoform X1.
   
 
 0.516
LOC106154070
Uncharacterized protein LOC106154070.
    
 
 0.455
LOC106167249
Ubiquinol-cytochrome-c reductase complex assembly factor 1.
      
 0.431
LOC106175853
Ubiquinol-cytochrome-c reductase complex assembly factor 1-like.
      
 0.431
LOC106152321
Polycomb protein eed.
    
 
 0.430
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.