STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112041850Uncharacterized protein LOC112041850. (681 aa)    
Predicted Functional Partners:
LOC106151762
Serine/threonine-protein kinase PLK4-like.
    
 0.841
LOC106179484
Serine/threonine-protein kinase PLK4.
    
 0.841
LOC106177733
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.625
LOC106170708
RNA polymerase-associated protein LEO1.
   
 
 0.612
LOC106173995
Protein LSM14 homolog B isoform X1.
   
 
 0.611
LOC106153144
FACT complex subunit SPT16.
   
 
 0.610
LOC106169017
Serine/threonine-protein kinase PLK.
    
 0.606
LOC106170668
Serine/threonine-protein kinase PLK.
    
 0.606
LOC106156762
Serine/threonine-protein kinase PLK1-like.
    
 0.606
LOC106169073
DNA-directed RNA polymerase II subunit RPB3 isoform X1.
   
 0.594
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.