STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106153558Collagen alpha-1(XII) chain-like. (215 aa)    
Predicted Functional Partners:
LOC106173422
Collagen alpha-1(XXI) chain-like.
  
     0.486
LOC106179680
Collagen alpha-6(VI) chain.
  
     0.472
LOC106157886
Matrilin-4.
  
 
  0.464
LOC106153818
Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like.
  
 
  0.420
LOC106157887
Matrilin-4-like.
  
 
  0.418
LOC106173425
Vitrin.
  
     0.406
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.