STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112041246Tetratricopeptide repeat protein 28-like. (945 aa)    
Predicted Functional Partners:
LOC106170708
RNA polymerase-associated protein LEO1.
    
 0.845
LOC106159270
Prostaglandin E synthase 3.
   
 0.609
LOC106181029
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 
 0.517
LOC106154958
Uncharacterized protein LOC106154958.
   
 0.512
LOC106159185
Heat shock protein 75 kDa, mitochondrial.
   
 0.512
LOC106164117
Thrombospondin-3b-like.
   
 0.512
LOC106169963
Uncharacterized protein LOC106169963.
   
 0.512
LOC106172755
Heat shock protein 83.
   
 0.512
LOC106177516
Hamartin isoform X1.
   
 0.512
LOC106178040
Heat shock protein 75 kDa, mitochondrial-like.
   
 0.512
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.