STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106178638Syndetin-like. (105 aa)    
Predicted Functional Partners:
LOC106165715
Vacuolar protein sorting-associated protein 51 homolog.
    
 
 0.960
LOC106169644
Vacuolar protein sorting-associated protein 53 homolog.
    
 
 0.960
LOC106164716
EARP-interacting protein homolog.
    
 
 0.789
LOC106162243
Vacuolar protein sorting-associated protein 52 homolog.
   
 
 0.764
LOC106175268
Vacuolar protein sorting-associated protein 52 homolog isoform X1.
   
 
 0.764
LOC106167470
Vacuolar protein sorting-associated protein 54-like isoform X1.
   
 
 0.720
LOC106172754
Vacuolar protein sorting-associated protein 54 isoform X1.
   
 
 0.720
LOC106165625
cyclin-G-associated kinase.
   
  
 0.637
LOC106176497
Coiled-coil domain-containing protein 186 isoform X1.
      
 0.565
LOC106166203
Syntaxin-6.
    
 
 0.518
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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