STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106157148Synaptotagmin-like protein 2. (1615 aa)    
Predicted Functional Partners:
LOC106176107
Uncharacterized protein LOC106176107.
     
 0.702
LOC106152893
Uncharacterized protein LOC106152893 isoform X1.
     
 0.592
LOC106163513
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
     
 0.520
LOC106171880
Peripheral plasma membrane protein CASK-like.
     
 0.520
LOC106172900
Peripheral plasma membrane protein CASK-like.
     
 0.520
LOC106163926
Regulating synaptic membrane exocytosis protein 2-like.
     
0.491
LOC106175848
Regulating synaptic membrane exocytosis protein 2-like.
     
 0.491
LOC106181694
Regulating synaptic membrane exocytosis protein 2-like.
     
0.491
LOC106164358
Ras-related protein Rab-27A isoform X1.
   
 
 0.488
LOC106164752
E3 ubiquitin-protein ligase SH3RF1-like.
  
 
  0.465
Your Current Organism:
Lingula anatina
NCBI taxonomy Id: 7574
Other names: L. anatina, Lingula lingua, Lingula unguis
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