STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADJ64241.1Conserved hypothetical protein; S - Function unknown. (322 aa)    
Predicted Functional Partners:
ADJ64242.1
Glycosyltransferase group 1 protein.
 
     0.954
ADJ64243.1
Conserved hypothetical protein; S - Function unknown.
 
     0.954
ADJ64244.1
Glycosyl transferase group 1 protein.
 
     0.952
ADJ64246.1
Membrane-anchored group 1 glycosyltransferase protein.
 
     0.931
ADJ64247.1
Glycosyltransferase 1 protein.
 
     0.930
asnB
Asparagine synthase (glutamine-hydrolyzing) protein.
 
     0.929
ADJ64240.1
Xylanase/chitin deacetylase protein.
 
   
 0.907
ADJ64248.1
Polysaccharide deacetylase protein.
 
   
 0.907
ADJ64249.1
Glycosyltransferase protein.
 
     0.893
ADJ64237.1
Conserved hypothetical protein; S - Function unknown.
 
     0.889
Your Current Organism:
Herbaspirillum seropedicae
NCBI taxonomy Id: 757424
Other names: H. seropedicae SmR1, Herbaspirillum seropedicae SmR1, Herbaspirillum seropedicae str. SmR1, Herbaspirillum seropedicae strain SmR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.