STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0014022Copine domain-containing protein. (224 aa)    
Predicted Functional Partners:
scyTo_0003242
C2 domain-containing protein.
 
     0.671
scyTo_0016204
Uncharacterized protein.
   
 
 0.664
scyTo_0011866
C2 domain-containing protein.
 
     0.636
scyTo_0005076
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.614
scyTo_0008790
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.606
scyTo_0022695
C2 domain-containing protein.
 
     0.603
scyTo_0017921
C2 domain-containing protein.
 
     0.565
scyTo_0003744
Uncharacterized protein; Belongs to the peptidase S8 family.
     
 0.539
scyTo_0004842
Uncharacterized protein.
     
 0.533
scyTo_0014757
SAC domain-containing protein.
     
 0.530
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.