STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0010996Uncharacterized protein. (515 aa)    
Predicted Functional Partners:
scyTo_0024332
Uncharacterized protein.
    
 0.992
scyTo_0007335
Uncharacterized protein.
   
 0.990
scyTo_0014087
TPR_REGION domain-containing protein.
   
 0.986
scyTo_0013064
TPR_REGION domain-containing protein.
    
 0.980
scyTo_0018141
Uncharacterized protein.
    
 0.980
scyTo_0007959
Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.
   
 0.963
scyTo_0013629
Uncharacterized protein.
    
 0.955
scyTo_0020914
Uncharacterized protein.
    
 0.955
scyTo_0013750
PHTB1_C domain-containing protein.
 
  
  0.953
scyTo_0007958
BTB domain-containing protein.
   
 0.944
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.