STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0014060Rab-GAP TBC domain-containing protein. (490 aa)    
Predicted Functional Partners:
scyTo_0027453
Uncharacterized protein.
    
 0.831
scyTo_0009508
Uncharacterized protein.
   
 0.809
scyTo_0019007
Uncharacterized protein.
   
 0.788
scyTo_0019038
Uncharacterized protein.
    
 0.760
scyTo_0003245
Uncharacterized protein.
   
 0.733
scyTo_0024539
Uncharacterized protein.
   
 0.733
scyTo_0026837
Uncharacterized protein.
   
 0.733
scyTo_0004831
Uncharacterized protein.
   
 0.722
scyTo_0010449
Uncharacterized protein.
   
 0.722
scyTo_0008215
Uncharacterized protein.
   
 0.718
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.