STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0011015SAM domain-containing protein. (522 aa)    
Predicted Functional Partners:
scyTo_0014711
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.982
scyTo_0004511
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.969
scyTo_0018982
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.967
scyTo_0002800
Uncharacterized protein.
   
 0.951
scyTo_0019649
PPM-type phosphatase domain-containing protein.
   
 0.951
scyTo_0021331
PPM-type phosphatase domain-containing protein.
   
 0.951
scyTo_0006483
RanBP2-type domain-containing protein.
    
 0.949
scyTo_0023238
Protein kinase domain-containing protein.
   
 0.947
scyTo_0005082
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.933
scyTo_0022725
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
 0.927
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.