STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0009076RHD domain-containing protein. (638 aa)    
Predicted Functional Partners:
scyTo_0014522
ANK_REP_REGION domain-containing protein.
   
 0.959
scyTo_0014521
ANK_REP_REGION domain-containing protein.
   
 0.946
scyTo_0009610
ANK_REP_REGION domain-containing protein.
   
 0.946
scyTo_0016299
ANK_REP_REGION domain-containing protein.
 
 
 0.938
scyTo_0013079
Uncharacterized protein.
    
 0.924
scyTo_0013274
N-lysine methyltransferase SETD6; Protein-lysine N-methyltransferase. Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SETD6 subfamily.
    
 0.916
scyTo_0019240
RHD domain-containing protein.
  
0.915
scyTo_0024053
Uncharacterized protein.
   
 0.909
scyTo_0025101
ANK_REP_REGION domain-containing protein.
   
 0.909
scyTo_0012610
Uncharacterized protein.
    
 0.903
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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