STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0012624Uncharacterized protein. (273 aa)    
Predicted Functional Partners:
scyTo_0025648
GOLD domain-containing protein; Belongs to the EMP24/GP25L family.
   
 0.912
scyTo_0020084
GOLD domain-containing protein.
   
 0.911
scyTo_0007798
Cytochrome b5 heme-binding domain-containing protein.
  
 
 0.875
scyTo_0004452
GOLD domain-containing protein.
   
 0.858
scyTo_0015343
GOLD domain-containing protein.
   
 0.858
scyTo_0023195
GOLD domain-containing protein.
   
 0.858
scyTo_0007439
ER lumen protein-retaining receptor.
   
 0.855
scyTo_0010897
Uncharacterized protein.
   
 0.855
scyTo_0007615
GOLD domain-containing protein.
   
 0.806
scyTo_0008079
TRIF-NTD domain-containing protein.
   
 0.806
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.