STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0012709Sod_Cu domain-containing protein. (136 aa)    
Predicted Functional Partners:
scyTo_0013567
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.968
scyTo_0006257
DJ-1_PfpI domain-containing protein.
  
 0.952
scyTo_0007718
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.926
scyTo_0003090
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 
 0.821
scyTo_0005194
ANK_REP_REGION domain-containing protein.
   
 0.819
scyTo_0012541
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 0.819
scyTo_0011724
Thioredoxin domain-containing protein; Belongs to the NDK family.
   
 0.799
scyTo_0018381
Uncharacterized protein.
   
 0.799
scyTo_0023698
Uncharacterized protein.
   
  0.793
scyTo_0018023
HMA domain-containing protein.
    
 0.780
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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