STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0009169Phosphodiesterase. (645 aa)    
Predicted Functional Partners:
scyTo_0007730
PfkB domain-containing protein.
     
 0.897
scyTo_0005813
Pribosyltran domain-containing protein.
     
 0.876
scyTo_0002526
SMB domain-containing protein.
     
 0.876
scyTo_0002528
SMB domain-containing protein.
     
 0.876
scyTo_0004376
dNK domain-containing protein.
     
 0.875
scyTo_0010404
Uncharacterized protein.
     
 0.875
AK3
GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.
     
 0.875
scyTo_0014805
Uncharacterized protein.
     
 0.872
scyTo_0012704
dNK domain-containing protein.
     
 0.870
scyTo_0014161
Uncharacterized protein.
     
 0.870
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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