STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0003969Uncharacterized protein. (278 aa)    
Predicted Functional Partners:
scyTo_0011855
Uncharacterized protein; Belongs to the paxillin family.
   
 0.975
scyTo_0007552
Uncharacterized protein.
   
 0.955
scyTo_0003711
LIM domain-containing protein.
   
 0.955
scyTo_0022832
Protein kinase domain-containing protein.
   
 0.952
scyTo_0023618
ANK_REP_REGION domain-containing protein.
   
 0.952
scyTo_0024206
Uncharacterized protein.
   
 0.952
scyTo_0025068
Protein kinase domain-containing protein.
   
 0.952
scyTo_0015451
Uncharacterized protein.
   
 0.942
scyTo_0015805
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.923
scyTo_0013338
Uncharacterized protein.
    
 0.913
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.