STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0006893zf_Hakai domain-containing protein. (350 aa)    
Predicted Functional Partners:
scyTo_0016826
Uncharacterized protein.
    
 
 0.961
scyTo_0021660
Uncharacterized protein.
    
 
 0.928
scyTo_0010312
VIR_N domain-containing protein.
    
 
 0.877
scyTo_0022680
Uncharacterized protein.
    
 
 0.877
scyTo_0005208
Uncharacterized protein.
    
 
 0.839
scyTo_0017084
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 
 0.783
scyTo_0011469
C3H1-type domain-containing protein.
    
 
 0.655
scyTo_0017616
Uncharacterized protein; Belongs to the MT-A70-like family.
    
 
 0.578
scyTo_0006390
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
  
 0.506
scyTo_0004004
Uncharacterized protein.
      
 0.489
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.