STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0012780Fucosidase_C domain-containing protein. (170 aa)    
Predicted Functional Partners:
scyTo_0023280
Uncharacterized protein.
  
 
0.835
scyTo_0019999
Alpha-galactosidase.
   
 
 0.696
scyTo_0018764
Melibiase_2_C domain-containing protein; Belongs to the glycosyl hydrolase 27 family.
   
 
 0.696
scyTo_0003954
ERCC4 domain-containing protein.
   
 
 0.694
scyTo_0002183
Uncharacterized protein.
    
  0.691
scyTo_0012270
CBAH domain-containing protein.
   
 
 0.624
scyTo_0022721
Uncharacterized protein.
 
     0.605
scyTo_0004319
Uncharacterized protein; Belongs to the acid ceramidase family.
   
 
 0.574
scyTo_0019155
Uncharacterized protein.
   
  
 0.565
scyTo_0009453
MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
 
 0.560
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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