STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0011189Uncharacterized protein. (167 aa)    
Predicted Functional Partners:
scyTo_0001879
RING-type domain-containing protein.
   
 
 0.709
scyTo_0002786
Hist_deacetyl domain-containing protein.
    
 0.606
scyTo_0003118
Uncharacterized protein.
  
 0.600
scyTo_0009817
Hist_deacetyl domain-containing protein.
    
  0.588
scyTo_0012411
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.588
scyTo_0006703
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.588
scyTo_0015657
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.588
scyTo_0012141
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 
 0.521
scyTo_0019029
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
      
 0.502
scyTo_0022935
Protein yippee-like; Belongs to the yippee family.
      
 0.493
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.