STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0011205Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
scyTo_0007941
2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2.
   
 0.989
scyTo_0012282
DPH-type MB domain-containing protein.
   
 0.965
scyTo_0004009
Tr-type G domain-containing protein.
    
 0.944
scyTo_0009393
Tr-type G domain-containing protein.
    
 0.879
scyTo_0007403
Tr-type G domain-containing protein.
    
 0.879
scyTo_0004722
Tr-type G domain-containing protein.
    
 0.879
scyTo_0005128
EFG_C domain-containing protein.
    
 0.879
scyTo_0017678
Uncharacterized protein.
    
 0.879
scyTo_0023294
EFG_II domain-containing protein.
    
 0.879
scyTo_0018166
TP_methylase domain-containing protein.
   
 0.875
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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