Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
scyTo_0004009 | scyTo_0007941 | A0A401NJ02 | A0A401P0Y8 | Tr-type G domain-containing protein. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 0.965 |
scyTo_0004009 | scyTo_0011205 | A0A401NJ02 | A0A401NJ00 | Tr-type G domain-containing protein. | Uncharacterized protein. | 0.944 |
scyTo_0004009 | scyTo_0012282 | A0A401NJ02 | A0A401P5Q8 | Tr-type G domain-containing protein. | DPH-type MB domain-containing protein. | 0.939 |
scyTo_0004009 | scyTo_0018166 | A0A401NJ02 | A0A401PPP4 | Tr-type G domain-containing protein. | TP_methylase domain-containing protein. | 0.932 |
scyTo_0004722 | scyTo_0007941 | A0A401NWA9 | A0A401P0Y8 | Tr-type G domain-containing protein. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 0.879 |
scyTo_0004722 | scyTo_0011205 | A0A401NWA9 | A0A401NJ00 | Tr-type G domain-containing protein. | Uncharacterized protein. | 0.879 |
scyTo_0004722 | scyTo_0012282 | A0A401NWA9 | A0A401P5Q8 | Tr-type G domain-containing protein. | DPH-type MB domain-containing protein. | 0.822 |
scyTo_0004722 | scyTo_0018166 | A0A401NWA9 | A0A401PPP4 | Tr-type G domain-containing protein. | TP_methylase domain-containing protein. | 0.813 |
scyTo_0005128 | scyTo_0007941 | A0A401P2T5 | A0A401P0Y8 | EFG_C domain-containing protein. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 0.879 |
scyTo_0005128 | scyTo_0009393 | A0A401P2T5 | A0A401NLJ6 | EFG_C domain-containing protein. | Tr-type G domain-containing protein. | 0.900 |
scyTo_0005128 | scyTo_0011205 | A0A401P2T5 | A0A401NJ00 | EFG_C domain-containing protein. | Uncharacterized protein. | 0.879 |
scyTo_0005128 | scyTo_0012282 | A0A401P2T5 | A0A401P5Q8 | EFG_C domain-containing protein. | DPH-type MB domain-containing protein. | 0.822 |
scyTo_0005128 | scyTo_0018166 | A0A401P2T5 | A0A401PPP4 | EFG_C domain-containing protein. | TP_methylase domain-containing protein. | 0.813 |
scyTo_0007403 | scyTo_0007941 | A0A401NRT6 | A0A401P0Y8 | Tr-type G domain-containing protein. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 0.879 |
scyTo_0007403 | scyTo_0011205 | A0A401NRT6 | A0A401NJ00 | Tr-type G domain-containing protein. | Uncharacterized protein. | 0.879 |
scyTo_0007403 | scyTo_0012282 | A0A401NRT6 | A0A401P5Q8 | Tr-type G domain-containing protein. | DPH-type MB domain-containing protein. | 0.822 |
scyTo_0007403 | scyTo_0017678 | A0A401NRT6 | A0A401PXQ1 | Tr-type G domain-containing protein. | Uncharacterized protein. | 0.949 |
scyTo_0007403 | scyTo_0018166 | A0A401NRT6 | A0A401PPP4 | Tr-type G domain-containing protein. | TP_methylase domain-containing protein. | 0.813 |
scyTo_0007403 | scyTo_0023294 | A0A401NRT6 | A0A401Q801 | Tr-type G domain-containing protein. | EFG_II domain-containing protein. | 0.512 |
scyTo_0007941 | scyTo_0004009 | A0A401P0Y8 | A0A401NJ02 | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | Tr-type G domain-containing protein. | 0.965 |
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