STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0014248Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (249 aa)    
Predicted Functional Partners:
scyTo_0020449
Nitroreductase domain-containing protein.
    
 0.847
scyTo_0016183
Fe-ADH domain-containing protein.
  
 
 0.747
scyTo_0001017
Uncharacterized protein.
    
  0.708
scyTo_0005491
Uncharacterized protein.
    
  0.708
scyTo_0014403
Uncharacterized protein.
     
 0.600
scyTo_0008501
Flavoprotein domain-containing protein.
     
 0.585
scyTo_0014249
Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
   
  
 0.582
scyTo_0005993
HEM4 domain-containing protein.
  
  
 0.582
scyTo_0014057
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.569
scyTo_0012584
VOC domain-containing protein.
     
 0.554
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.