STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0012825MARVEL domain-containing protein. (174 aa)    
Predicted Functional Partners:
scyTo_0012826
MARVEL domain-containing protein.
      
0.533
scyTo_0003769
MARVEL domain-containing protein.
      
 0.524
scyTo_0009668
Uncharacterized protein.
      
 0.517
scyTo_0003770
MARVEL domain-containing protein.
      
 0.508
scyTo_0013472
CPSF_A domain-containing protein.
      
 0.503
scyTo_0001463
Gla domain-containing protein.
      
 0.478
scyTo_0023124
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.471
scyTo_0012767
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.469
scyTo_0003768
MARVEL domain-containing protein.
      
 0.465
scyTo_0009915
LisH domain-containing protein.
   
  
 0.458
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.